Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Gm15590-201ENSMUST00000078419 552 ntBASIC15.67■□□□□ 0.1
Usp11Q99K46 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp11Q99K46 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.67■□□□□ 0.1
Usp11Q99K46 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.66■□□□□ 0.1
Usp11Q99K46 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.66■□□□□ 0.1
Usp11Q99K46 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usp11Q99K46 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.66■□□□□ 0.1
Usp11Q99K46 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp11Q99K46 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.66■□□□□ 0.1
Usp11Q99K46 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usp11Q99K46 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Usp11Q99K46 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Usp11Q99K46 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp11Q99K46 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp11Q99K46 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.65■□□□□ 0.1
Usp11Q99K46 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.65■□□□□ 0.1
Usp11Q99K46 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Usp11Q99K46 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp11Q99K46 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp11Q99K46 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp11Q99K46 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp11Q99K46 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp11Q99K46 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp11Q99K46 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp11Q99K46 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp11Q99K46 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.64■□□□□ 0.09
Usp11Q99K46 Gm18489-201ENSMUST00000172565 551 ntBASIC15.64■□□□□ 0.09
Usp11Q99K46 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms