Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha3Q91Y16 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Gm27301-201ENSMUST00000184012 127 ntBASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha3Q91Y16 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha3Q91Y16 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Gm2756-201ENSMUST00000195851 400 ntBASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Thap2-203ENSMUST00000218989 527 ntBASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha3Q91Y16 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm5177-201ENSMUST00000183092 997 ntBASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm2272-201ENSMUST00000194903 582 ntBASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm43767-201ENSMUST00000198933 381 ntBASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm10175-201ENSMUST00000086013 645 ntBASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms