Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga3Q91XY5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Gm9682-201ENSMUST00000197505 556 ntBASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga3Q91XY5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga3Q91XY5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Gm27741-201ENSMUST00000185060 237 ntBASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga3Q91XY5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms