Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vsx1Q91V10 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.67□□□□□ -0.06
Vsx1Q91V10 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Gm6180-201ENSMUST00000065243 498 ntBASIC14.67□□□□□ -0.06
Vsx1Q91V10 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.67□□□□□ -0.06
Vsx1Q91V10 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vsx1Q91V10 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.66□□□□□ -0.06
Vsx1Q91V10 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vsx1Q91V10 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vsx1Q91V10 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vsx1Q91V10 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.65□□□□□ -0.06
Vsx1Q91V10 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms