Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.35□□□□□ -0.27
Odf4Q8VI88 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Odf4Q8VI88 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.34□□□□□ -0.27
Odf4Q8VI88 Gm18622-201ENSMUST00000219361 595 ntBASIC13.34□□□□□ -0.27
Odf4Q8VI88 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.34□□□□□ -0.27
Odf4Q8VI88 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Odf4Q8VI88 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Odf4Q8VI88 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Odf4Q8VI88 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.33□□□□□ -0.28
Odf4Q8VI88 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Gm14140-201ENSMUST00000119999 995 ntBASIC13.33□□□□□ -0.28
Odf4Q8VI88 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Gm27628-201ENSMUST00000184911 107 ntBASIC13.33□□□□□ -0.28
Odf4Q8VI88 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Odf4Q8VI88 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.32□□□□□ -0.28
Odf4Q8VI88 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.32□□□□□ -0.28
Odf4Q8VI88 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms