Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim60Q8VI40 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim60Q8VI40 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Gm7222-201ENSMUST00000117512 906 ntBASIC15.37■□□□□ 0.05
Trim60Q8VI40 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim60Q8VI40 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.36■□□□□ 0.05
Trim60Q8VI40 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim60Q8VI40 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.35■□□□□ 0.05
Trim60Q8VI40 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Gm25990-201ENSMUST00000102440 86 ntBASIC15.35■□□□□ 0.05
Trim60Q8VI40 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim60Q8VI40 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Carlr-201ENSMUST00000181515 2574 ntBASIC15.35■□□□□ 0.05
Trim60Q8VI40 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim60Q8VI40 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.35■□□□□ 0.05
Trim60Q8VI40 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms