Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Gm4995-201ENSMUST00000117247 432 ntBASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps4aQ8VEJ9 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Gm5186-201ENSMUST00000218781 920 ntBASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.43□□□□□ -0.1
Vps4aQ8VEJ9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Gm8097-201ENSMUST00000117903 829 ntBASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps4aQ8VEJ9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.41□□□□□ -0.1
Vps4aQ8VEJ9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms