Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup35Q8R4R6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Gm8655-201ENSMUST00000221159 852 ntBASIC12.13□□□□□ -0.47
Nup35Q8R4R6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nup35Q8R4R6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Olfr129-201ENSMUST00000122318 993 ntBASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup35Q8R4R6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup35Q8R4R6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms