Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc58Q8R3Q6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc58Q8R3Q6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc58Q8R3Q6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc58Q8R3Q6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc58Q8R3Q6 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.33□□□□□ -0.27
Ccdc58Q8R3Q6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc58Q8R3Q6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc58Q8R3Q6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Gm8344-201ENSMUST00000119813 856 ntBASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Gm15794-201ENSMUST00000120182 631 ntBASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Gm44454-201ENSMUST00000198541 138 ntBASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc58Q8R3Q6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms