Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3a1Q8K4Z5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Rpph1-201ENSMUST00000175096 319 ntBASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sf3a1Q8K4Z5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Gm20553-201ENSMUST00000204205 844 ntBASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sf3a1Q8K4Z5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Sf3a1Q8K4Z5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Sf3a1Q8K4Z5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Sf3a1Q8K4Z5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sf3a1Q8K4Z5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sf3a1Q8K4Z5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms