Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.02□□□□□ -0.17
Clrn1Q8K445 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clrn1Q8K445 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.01□□□□□ -0.17
Clrn1Q8K445 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Gm9727-201ENSMUST00000161387 555 ntBASIC14.01□□□□□ -0.17
Clrn1Q8K445 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.01□□□□□ -0.17
Clrn1Q8K445 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clrn1Q8K445 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Clrn1Q8K445 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Clrn1Q8K445 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14□□□□□ -0.17
Clrn1Q8K445 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14□□□□□ -0.17
Clrn1Q8K445 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14□□□□□ -0.17
Clrn1Q8K445 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14□□□□□ -0.17
Clrn1Q8K445 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14□□□□□ -0.17
Clrn1Q8K445 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clrn1Q8K445 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Clrn1Q8K445 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clrn1Q8K445 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Clrn1Q8K445 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clrn1Q8K445 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Gm6443-201ENSMUST00000203599 874 ntBASIC13.99□□□□□ -0.17
Clrn1Q8K445 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.99□□□□□ -0.17
Clrn1Q8K445 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms