Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Calcoco1Q8CGU1 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Calcoco1Q8CGU1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Calcoco1Q8CGU1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Calcoco1Q8CGU1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Calcoco1Q8CGU1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Calcoco1Q8CGU1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Calcoco1Q8CGU1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Calcoco1Q8CGU1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Calcoco1Q8CGU1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms