Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShfQ8CG80 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.26□□□□□ -0.29
ShfQ8CG80 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.26□□□□□ -0.29
ShfQ8CG80 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
ShfQ8CG80 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.26□□□□□ -0.29
ShfQ8CG80 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
ShfQ8CG80 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShfQ8CG80 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
ShfQ8CG80 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ShfQ8CG80 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
ShfQ8CG80 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.25□□□□□ -0.29
ShfQ8CG80 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ShfQ8CG80 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.25□□□□□ -0.29
ShfQ8CG80 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.25□□□□□ -0.29
ShfQ8CG80 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.25□□□□□ -0.29
ShfQ8CG80 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ShfQ8CG80 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.25□□□□□ -0.29
ShfQ8CG80 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ShfQ8CG80 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
ShfQ8CG80 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ShfQ8CG80 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ShfQ8CG80 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.24□□□□□ -0.29
ShfQ8CG80 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.24□□□□□ -0.29
ShfQ8CG80 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.24□□□□□ -0.29
ShfQ8CG80 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ShfQ8CG80 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms