Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.48□□□□□ -0.09
Rab43Q8CG50 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab43Q8CG50 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rab43Q8CG50 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.47□□□□□ -0.09
Rab43Q8CG50 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Gm18766-201ENSMUST00000189811 808 ntBASIC14.47□□□□□ -0.09
Rab43Q8CG50 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.47□□□□□ -0.09
Rab43Q8CG50 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.47□□□□□ -0.09
Rab43Q8CG50 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab43Q8CG50 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.46□□□□□ -0.09
Rab43Q8CG50 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab43Q8CG50 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rab43Q8CG50 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.45□□□□□ -0.1
Rab43Q8CG50 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab43Q8CG50 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms