Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.28■□□□□ 0.52
Smc4Q8CG47 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.28■□□□□ 0.52
Smc4Q8CG47 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Gm5779-201ENSMUST00000218467 910 ntBASIC18.28■□□□□ 0.52
Smc4Q8CG47 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.28■□□□□ 0.52
Smc4Q8CG47 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.28■□□□□ 0.52
Smc4Q8CG47 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.27■□□□□ 0.52
Smc4Q8CG47 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.27■□□□□ 0.52
Smc4Q8CG47 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Smc4Q8CG47 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc4Q8CG47 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc4Q8CG47 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Gm13464-201ENSMUST00000119418 935 ntBASIC18.26■□□□□ 0.51
Smc4Q8CG47 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.26■□□□□ 0.51
Smc4Q8CG47 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.26■□□□□ 0.51
Smc4Q8CG47 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc4Q8CG47 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Gm15693-201ENSMUST00000120470 637 ntBASIC18.25■□□□□ 0.51
Smc4Q8CG47 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Gm5479-201ENSMUST00000160578 435 ntBASIC18.25■□□□□ 0.51
Smc4Q8CG47 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smc4Q8CG47 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms