Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.33□□□□□ -0.27
Lysmd4Q8CC84 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Lysmd4Q8CC84 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lysmd4Q8CC84 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lysmd4Q8CC84 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lysmd4Q8CC84 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms