Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a6Q8C6K9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Gm20445-201ENSMUST00000061905 565 ntBASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a6Q8C6K9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Gm13829-201ENSMUST00000119600 138 ntBASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Gm8602-201ENSMUST00000184045 607 ntBASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col6a6Q8C6K9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms