Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc60Q8C4J0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc60Q8C4J0 Carlr-201ENSMUST00000181515 2574 ntBASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Gm11025-201ENSMUST00000140773 466 ntBASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc60Q8C4J0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm15483-201ENSMUST00000120338 456 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm14822-201ENSMUST00000122247 291 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.9■□□□□ 0.62
Ccdc60Q8C4J0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms