Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap1Q8BTW8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Auts2-212ENSMUST00000178555 309 ntBASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm38225-201ENSMUST00000194001 393 ntBASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap1Q8BTW8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm27920-201ENSMUST00000183953 96 ntBASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdk5rap1Q8BTW8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdk5rap1Q8BTW8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Cdk5rap1Q8BTW8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Cdk5rap1Q8BTW8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.08□□□□□ -0.16
Cdk5rap1Q8BTW8 Gm9824-201ENSMUST00000178707 561 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms