Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm12350-201ENSMUST00000121208 462 ntBASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Gm10499-201ENSMUST00000174094 934 ntBASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn3Q8BHH8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Gm45167-201ENSMUST00000208007 322 ntBASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Clrn3Q8BHH8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Gm15590-201ENSMUST00000078419 552 ntBASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn3Q8BHH8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn3Q8BHH8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn3Q8BHH8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn3Q8BHH8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn3Q8BHH8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Gm7461-201ENSMUST00000058918 827 ntBASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn3Q8BHH8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms