Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nucks1Q80XU3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Gm7153-201ENSMUST00000117092 455 ntBASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Carlr-201ENSMUST00000181515 2574 ntBASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nucks1Q80XU3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Mir8098-201ENSMUST00000184011 137 ntBASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Gm18246-201ENSMUST00000221023 728 ntBASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nucks1Q80XU3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Gm11452-201ENSMUST00000122376 690 ntBASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Gm10060-201ENSMUST00000212002 111 ntBASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Gm10819-201ENSMUST00000099988 561 ntBASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nucks1Q80XU3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nucks1Q80XU3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms