Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Usp6nlQ80XC3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp6nlQ80XC3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm29667-201ENSMUST00000190817 490 ntBASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp6nlQ80XC3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp6nlQ80XC3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp6nlQ80XC3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp6nlQ80XC3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.33■□□□□ 0.21
Usp6nlQ80XC3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp6nlQ80XC3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp6nlQ80XC3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp6nlQ80XC3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Gm7653-201ENSMUST00000214567 508 ntBASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp6nlQ80XC3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms