Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Gm25948-201ENSMUST00000175334 112 ntBASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Gm38225-201ENSMUST00000194001 393 ntBASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh19Q80TF3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Gm2810-201ENSMUST00000118681 990 ntBASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh19Q80TF3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh19Q80TF3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Pcdh19Q80TF3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms