Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Gm12341-201ENSMUST00000119724 503 ntBASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 AC139580.1-202ENSMUST00000223574 928 ntBASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpap1Q80TE0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Gm5303-201ENSMUST00000117943 1252 ntBASIC22.77■■□□□ 1.24
Rpap1Q80TE0 AC166349.1-201ENSMUST00000220866 695 ntBASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpap1Q80TE0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.77■■□□□ 1.23
Rpap1Q80TE0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Rpap1Q80TE0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Gm45667-201ENSMUST00000210380 1316 ntBASIC22.76■■□□□ 1.23
Rpap1Q80TE0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Gm5354-201ENSMUST00000182417 973 ntBASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Gm28911-201ENSMUST00000188837 117 ntBASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Gm33320-201ENSMUST00000192232 530 ntBASIC22.75■■□□□ 1.23
Rpap1Q80TE0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC22.75■■□□□ 1.23
Rpap1Q80TE0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Rpap1Q80TE0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Gm4984-201ENSMUST00000115987 360 ntBASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms