Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Gm27646-201ENSMUST00000183989 110 ntBASIC12.11□□□□□ -0.47
Vma21Q78T54 Gm17807-201ENSMUST00000186869 298 ntBASIC12.11□□□□□ -0.47
Vma21Q78T54 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.11□□□□□ -0.47
Vma21Q78T54 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Gm6296-201ENSMUST00000222599 943 ntBASIC12.11□□□□□ -0.47
Vma21Q78T54 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vma21Q78T54 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vma21Q78T54 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vma21Q78T54 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.1□□□□□ -0.47
Vma21Q78T54 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.1□□□□□ -0.47
Vma21Q78T54 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.1□□□□□ -0.47
Vma21Q78T54 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vma21Q78T54 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Vma21Q78T54 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Vma21Q78T54 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.09□□□□□ -0.47
Vma21Q78T54 Gm43767-201ENSMUST00000198933 381 ntBASIC12.09□□□□□ -0.47
Vma21Q78T54 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vma21Q78T54 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vma21Q78T54 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.09□□□□□ -0.47
Vma21Q78T54 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vma21Q78T54 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vma21Q78T54 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms