Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sned1Q70E20 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.63■□□□□ 0.41
Sned1Q70E20 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.63■□□□□ 0.41
Sned1Q70E20 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.63■□□□□ 0.41
Sned1Q70E20 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.63■□□□□ 0.41
Sned1Q70E20 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sned1Q70E20 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sned1Q70E20 Gm26464-201ENSMUST00000157094 305 ntBASIC17.62■□□□□ 0.41
Sned1Q70E20 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.62■□□□□ 0.41
Sned1Q70E20 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.62■□□□□ 0.41
Sned1Q70E20 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.62■□□□□ 0.41
Sned1Q70E20 Gm29649-201ENSMUST00000185649 419 ntBASIC17.62■□□□□ 0.41
Sned1Q70E20 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.62■□□□□ 0.41
Sned1Q70E20 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.62■□□□□ 0.41
Sned1Q70E20 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.62■□□□□ 0.41
Sned1Q70E20 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sned1Q70E20 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sned1Q70E20 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sned1Q70E20 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.61■□□□□ 0.41
Sned1Q70E20 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Sned1Q70E20 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sned1Q70E20 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.61■□□□□ 0.41
Sned1Q70E20 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Gm13689-201ENSMUST00000119360 685 ntBASIC17.61■□□□□ 0.41
Sned1Q70E20 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.61■□□□□ 0.41
Sned1Q70E20 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Gm24644-201ENSMUST00000157114 139 ntBASIC17.61■□□□□ 0.41
Sned1Q70E20 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.61■□□□□ 0.41
Sned1Q70E20 Gm6013-201ENSMUST00000212264 699 ntBASIC17.61■□□□□ 0.41
Sned1Q70E20 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sned1Q70E20 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.6■□□□□ 0.41
Sned1Q70E20 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm15236-201ENSMUST00000117309 379 ntBASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm15957-201ENSMUST00000118893 974 ntBASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm13612-201ENSMUST00000119276 390 ntBASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.6■□□□□ 0.41
Sned1Q70E20 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm43094-201ENSMUST00000196549 921 ntBASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm18905-201ENSMUST00000205454 928 ntBASIC17.6■□□□□ 0.41
Sned1Q70E20 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.6■□□□□ 0.41
Sned1Q70E20 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sned1Q70E20 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sned1Q70E20 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.6■□□□□ 0.41
Sned1Q70E20 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sned1Q70E20 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sned1Q70E20 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Gm12882-201ENSMUST00000121696 517 ntBASIC17.59■□□□□ 0.41
Sned1Q70E20 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.59■□□□□ 0.41
Sned1Q70E20 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.59■□□□□ 0.41
Sned1Q70E20 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Gm9823-201ENSMUST00000051212 327 ntBASIC17.59■□□□□ 0.41
Sned1Q70E20 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sned1Q70E20 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms