Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Npc1l1Q6T3U4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Npc1l1Q6T3U4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Npc1l1Q6T3U4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Npc1l1Q6T3U4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Npc1l1Q6T3U4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Npc1l1Q6T3U4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Npc1l1Q6T3U4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Gm27618-201ENSMUST00000183671 60 ntBASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Npc1l1Q6T3U4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Gm15483-201ENSMUST00000120338 456 ntBASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1l1Q6T3U4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Gm8749-201ENSMUST00000117737 331 ntBASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Gm9824-201ENSMUST00000178707 561 ntBASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1l1Q6T3U4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Gm6415-201ENSMUST00000118488 348 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms