Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc2Q6PDG5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Gm4995-201ENSMUST00000117247 432 ntBASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc2Q6PDG5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Gm10175-201ENSMUST00000086013 645 ntBASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcc2Q6PDG5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Gm12134-201ENSMUST00000122109 520 ntBASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Gm17271-201ENSMUST00000165535 355 ntBASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smarcc2Q6PDG5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcc2Q6PDG5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms