Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Gm6296-201ENSMUST00000222599 943 ntBASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcd3Q6P9Z1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Smarcd3Q6P9Z1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Gm10819-201ENSMUST00000099988 561 ntBASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcd3Q6P9Z1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Gm10499-201ENSMUST00000174094 934 ntBASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms