Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Gm12151-201ENSMUST00000121374 290 ntBASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.24■□□□□ 0.19
Smchd1Q6P5D8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Gm14719-201ENSMUST00000121891 340 ntBASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Gm9824-201ENSMUST00000178707 561 ntBASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.23■□□□□ 0.19
Smchd1Q6P5D8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smchd1Q6P5D8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.21■□□□□ 0.19
Smchd1Q6P5D8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smchd1Q6P5D8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.21■□□□□ 0.18
Smchd1Q6P5D8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smchd1Q6P5D8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smchd1Q6P5D8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smchd1Q6P5D8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smchd1Q6P5D8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smchd1Q6P5D8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smchd1Q6P5D8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smchd1Q6P5D8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smchd1Q6P5D8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.2■□□□□ 0.18
Smchd1Q6P5D8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms