Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.65■□□□□ 0.26
Abcf1Q6P542 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abcf1Q6P542 Celf4-206ENSMUST00000224553 1729 ntBASIC16.65■□□□□ 0.26
Abcf1Q6P542 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Abcf1Q6P542 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Abcf1Q6P542 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.64■□□□□ 0.25
Abcf1Q6P542 Gm18622-201ENSMUST00000219361 595 ntBASIC16.64■□□□□ 0.25
Abcf1Q6P542 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.64■□□□□ 0.25
Abcf1Q6P542 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcf1Q6P542 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.63■□□□□ 0.25
Abcf1Q6P542 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Gm10060-201ENSMUST00000212002 111 ntBASIC16.63■□□□□ 0.25
Abcf1Q6P542 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.63■□□□□ 0.25
Abcf1Q6P542 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcf1Q6P542 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Gm25990-201ENSMUST00000102440 86 ntBASIC16.62■□□□□ 0.25
Abcf1Q6P542 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Gm44771-201ENSMUST00000206975 626 ntBASIC16.62■□□□□ 0.25
Abcf1Q6P542 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.62■□□□□ 0.25
Abcf1Q6P542 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.62■□□□□ 0.25
Abcf1Q6P542 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abcf1Q6P542 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.61■□□□□ 0.25
Abcf1Q6P542 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms