Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtl3Q6P1Y1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtl3Q6P1Y1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rtl3Q6P1Y1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtl3Q6P1Y1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtl3Q6P1Y1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Rtl3Q6P1Y1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Mir1895-201ENSMUST00000122615 79 ntBASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtl3Q6P1Y1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtl3Q6P1Y1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Gm14057-201ENSMUST00000120631 482 ntBASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Gm16026-204ENSMUST00000162652 683 ntBASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtl3Q6P1Y1 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms