Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.4□□□□□ -0.1
Cpsf6Q6NVF9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf6Q6NVF9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Carlr-201ENSMUST00000181515 2574 ntBASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf6Q6NVF9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf6Q6NVF9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms