Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm9719-201ENSMUST00000162765 543 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm29310-201ENSMUST00000185468 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21825-201ENSMUST00000185728 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm29109-201ENSMUST00000185895 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21896-201ENSMUST00000186520 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21873-201ENSMUST00000186728 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21794-201ENSMUST00000187056 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21880-201ENSMUST00000187275 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21826-201ENSMUST00000187451 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21198-201ENSMUST00000188393 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21749-201ENSMUST00000189343 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21901-201ENSMUST00000189568 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm29424-201ENSMUST00000189716 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm28599-201ENSMUST00000189838 694 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21867-201ENSMUST00000189917 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm29269-201ENSMUST00000190087 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21722-201ENSMUST00000190153 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm28423-201ENSMUST00000190701 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21899-201ENSMUST00000190745 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21910-201ENSMUST00000191163 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21849-201ENSMUST00000191571 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm28678-201ENSMUST00000191593 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm20910-201ENSMUST00000193268 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm21871-201ENSMUST00000194621 696 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Gm6888-201ENSMUST00000221983 706 ntBASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt40Q6IFX3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Gm27533-201ENSMUST00000183800 152 ntBASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt40Q6IFX3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Krt40Q6IFX3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Krt40Q6IFX3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Krt40Q6IFX3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt40Q6IFX3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt40Q6IFX3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms