Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atg9aQ68FE2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atg9aQ68FE2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atg9aQ68FE2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Gm5566-201ENSMUST00000116118 459 ntBASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Gm27306-201ENSMUST00000183970 107 ntBASIC17.8■□□□□ 0.44
Atg9aQ68FE2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg9aQ68FE2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Carlr-201ENSMUST00000181515 2574 ntBASIC17.79■□□□□ 0.44
Atg9aQ68FE2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Gm27533-201ENSMUST00000183800 152 ntBASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Gm6888-201ENSMUST00000221983 706 ntBASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.78■□□□□ 0.44
Atg9aQ68FE2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg9aQ68FE2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Gm8410-201ENSMUST00000117225 605 ntBASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Gm9719-201ENSMUST00000162765 543 ntBASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.77■□□□□ 0.44
Atg9aQ68FE2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms