Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Gm21470-201ENSMUST00000187680 696 ntBASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Knl1Q66JQ7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Gm11839-201ENSMUST00000120647 1953 ntBASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Gm15429-201ENSMUST00000151268 798 ntBASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Gm6283-201ENSMUST00000182369 1000 ntBASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Knl1Q66JQ7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gm19078-201ENSMUST00000206311 727 ntBASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Knl1Q66JQ7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 AC126253.1-201ENSMUST00000227974 824 ntBASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Zscan30-202ENSMUST00000224144 1458 ntBASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Knl1Q66JQ7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Gm13050-201ENSMUST00000122149 1345 ntBASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Gm15376-201ENSMUST00000122258 783 ntBASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Gm27572-201ENSMUST00000183702 255 ntBASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Knl1Q66JQ7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Knl1Q66JQ7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms