Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Col7a1Q63870 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm11524-201ENSMUST00000119349 807 ntBASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm26464-201ENSMUST00000157094 305 ntBASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm20482-202ENSMUST00000174729 825 ntBASIC12.03□□□□□ -0.48
Col7a1Q63870 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Col7a1Q63870 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col7a1Q63870 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.02□□□□□ -0.48
Col7a1Q63870 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.02□□□□□ -0.48
Col7a1Q63870 Gm25732-201ENSMUST00000175168 60 ntBASIC12.02□□□□□ -0.48
Col7a1Q63870 Gm7467-201ENSMUST00000185173 652 ntBASIC12.02□□□□□ -0.48
Col7a1Q63870 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.02□□□□□ -0.48
Col7a1Q63870 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.02□□□□□ -0.48
Col7a1Q63870 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Col7a1Q63870 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Col7a1Q63870 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col7a1Q63870 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.02□□□□□ -0.49
Col7a1Q63870 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.02□□□□□ -0.49
Col7a1Q63870 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.02□□□□□ -0.49
Col7a1Q63870 Gm24990-201ENSMUST00000157406 323 ntBASIC12.02□□□□□ -0.49
Col7a1Q63870 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col7a1Q63870 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.02□□□□□ -0.49
Col7a1Q63870 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col7a1Q63870 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.01□□□□□ -0.49
Col7a1Q63870 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Gm8959-201ENSMUST00000213150 571 ntBASIC12.01□□□□□ -0.49
Col7a1Q63870 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.01□□□□□ -0.49
Col7a1Q63870 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col7a1Q63870 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.01□□□□□ -0.49
Col7a1Q63870 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Gm43094-201ENSMUST00000196549 921 ntBASIC12.01□□□□□ -0.49
Col7a1Q63870 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col7a1Q63870 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col7a1Q63870 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col7a1Q63870 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12□□□□□ -0.49
Col7a1Q63870 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Gm6283-201ENSMUST00000182369 1000 ntBASIC12□□□□□ -0.49
Col7a1Q63870 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Col7a1Q63870 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col7a1Q63870 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms