Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.81■□□□□ 0.12
Six2Q62232 Gm10154-201ENSMUST00000084445 354 ntBASIC15.81■□□□□ 0.12
Six2Q62232 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Six2Q62232 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six2Q62232 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.8■□□□□ 0.12
Six2Q62232 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Six2Q62232 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Six2Q62232 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Six2Q62232 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Six2Q62232 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Six2Q62232 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Six2Q62232 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Gm9726-201ENSMUST00000180321 678 ntBASIC15.8■□□□□ 0.12
Six2Q62232 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.8■□□□□ 0.12
Six2Q62232 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six2Q62232 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.79■□□□□ 0.12
Six2Q62232 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Six2Q62232 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.79■□□□□ 0.12
Six2Q62232 Gm27301-201ENSMUST00000184012 127 ntBASIC15.79■□□□□ 0.12
Six2Q62232 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.79■□□□□ 0.12
Six2Q62232 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Six2Q62232 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.79■□□□□ 0.12
Six2Q62232 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Six2Q62232 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.79■□□□□ 0.12
Six2Q62232 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six2Q62232 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.78■□□□□ 0.12
Six2Q62232 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.78■□□□□ 0.12
Six2Q62232 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.78■□□□□ 0.12
Six2Q62232 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Six2Q62232 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Six2Q62232 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Six2Q62232 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Six2Q62232 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Six2Q62232 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Six2Q62232 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.78■□□□□ 0.12
Six2Q62232 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.78■□□□□ 0.12
Six2Q62232 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.78■□□□□ 0.12
Six2Q62232 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.78■□□□□ 0.12
Six2Q62232 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Six2Q62232 Olfr286-202ENSMUST00000205305 969 ntBASIC15.78■□□□□ 0.12
Six2Q62232 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six2Q62232 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms