Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trim27Q62158 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.22■□□□□ 0.51
Trim27Q62158 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Gm10175-201ENSMUST00000086013 645 ntBASIC18.22■□□□□ 0.51
Trim27Q62158 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim27Q62158 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.22■□□□□ 0.51
Trim27Q62158 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim27Q62158 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim27Q62158 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Gm14494-201ENSMUST00000118786 435 ntBASIC18.21■□□□□ 0.51
Trim27Q62158 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Rpph1-201ENSMUST00000175096 319 ntBASIC18.21■□□□□ 0.51
Trim27Q62158 Mir3113-201ENSMUST00000175478 76 ntBASIC18.21■□□□□ 0.51
Trim27Q62158 Gm9726-201ENSMUST00000180321 678 ntBASIC18.21■□□□□ 0.51
Trim27Q62158 Gm20553-201ENSMUST00000204205 844 ntBASIC18.21■□□□□ 0.51
Trim27Q62158 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim27Q62158 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Trim27Q62158 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim27Q62158 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim27Q62158 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.2■□□□□ 0.5
Trim27Q62158 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim27Q62158 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim27Q62158 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim27Q62158 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim27Q62158 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.2■□□□□ 0.5
Trim27Q62158 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim27Q62158 Mir8117-201ENSMUST00000184773 107 ntBASIC18.2■□□□□ 0.5
Trim27Q62158 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.2■□□□□ 0.5
Trim27Q62158 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim27Q62158 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim27Q62158 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim27Q62158 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim27Q62158 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Gm15427-201ENSMUST00000117288 531 ntBASIC18.19■□□□□ 0.5
Trim27Q62158 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.19■□□□□ 0.5
Trim27Q62158 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Olfr286-202ENSMUST00000205305 969 ntBASIC18.19■□□□□ 0.5
Trim27Q62158 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim27Q62158 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.19■□□□□ 0.5
Trim27Q62158 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Trim27Q62158 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim27Q62158 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim27Q62158 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms