Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ctr9Q62018 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ctr9Q62018 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.49■□□□□ 0.39
Ctr9Q62018 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.49■□□□□ 0.39
Ctr9Q62018 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Ctr9Q62018 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ctr9Q62018 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ctr9Q62018 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctr9Q62018 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ctr9Q62018 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ctr9Q62018 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.48■□□□□ 0.39
Ctr9Q62018 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Ctr9Q62018 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.48■□□□□ 0.39
Ctr9Q62018 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Ctr9Q62018 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.48■□□□□ 0.39
Ctr9Q62018 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.48■□□□□ 0.39
Ctr9Q62018 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ctr9Q62018 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctr9Q62018 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Gm2810-201ENSMUST00000118681 990 ntBASIC17.47■□□□□ 0.39
Ctr9Q62018 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.47■□□□□ 0.39
Ctr9Q62018 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Ctr9Q62018 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.47■□□□□ 0.39
Ctr9Q62018 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctr9Q62018 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.47■□□□□ 0.39
Ctr9Q62018 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ctr9Q62018 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ctr9Q62018 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ctr9Q62018 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Gm11543-201ENSMUST00000120758 370 ntBASIC17.46■□□□□ 0.39
Ctr9Q62018 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.46■□□□□ 0.39
Ctr9Q62018 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.46■□□□□ 0.39
Ctr9Q62018 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.46■□□□□ 0.39
Ctr9Q62018 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.46■□□□□ 0.39
Ctr9Q62018 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.46■□□□□ 0.39
Ctr9Q62018 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctr9Q62018 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms