Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Sox17Q61473 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox17Q61473 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Sox17Q61473 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox17Q61473 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Gm17808-201ENSMUST00000200859 894 ntBASIC13.96□□□□□ -0.17
Sox17Q61473 Gm45328-201ENSMUST00000210942 917 ntBASIC13.96□□□□□ -0.17
Sox17Q61473 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox17Q61473 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.96□□□□□ -0.17
Sox17Q61473 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox17Q61473 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sox17Q61473 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox17Q61473 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox17Q61473 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sox17Q61473 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox17Q61473 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox17Q61473 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox17Q61473 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Sox17Q61473 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox17Q61473 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.95□□□□□ -0.18
Sox17Q61473 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox17Q61473 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox17Q61473 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox17Q61473 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Mir3081-201ENSMUST00000175305 84 ntBASIC13.95□□□□□ -0.18
Sox17Q61473 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox17Q61473 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Sox17Q61473 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Sox17Q61473 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox17Q61473 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox17Q61473 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox17Q61473 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox17Q61473 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox17Q61473 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Sox17Q61473 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.94□□□□□ -0.18
Sox17Q61473 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox17Q61473 Gm25745-201ENSMUST00000174945 133 ntBASIC13.94□□□□□ -0.18
Sox17Q61473 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox17Q61473 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.94□□□□□ -0.18
Sox17Q61473 Gm44454-201ENSMUST00000198541 138 ntBASIC13.94□□□□□ -0.18
Sox17Q61473 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox17Q61473 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox17Q61473 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox17Q61473 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox17Q61473 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox17Q61473 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox17Q61473 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.93□□□□□ -0.18
Sox17Q61473 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox17Q61473 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms