Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Foxd1Q61345 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Gm37917-201ENSMUST00000194711 392 ntBASIC17.12■□□□□ 0.33
Foxd1Q61345 Gm7775-201ENSMUST00000218871 853 ntBASIC17.12■□□□□ 0.33
Foxd1Q61345 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.12■□□□□ 0.33
Foxd1Q61345 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.12■□□□□ 0.33
Foxd1Q61345 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.12■□□□□ 0.33
Foxd1Q61345 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxd1Q61345 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Foxd1Q61345 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.11■□□□□ 0.33
Foxd1Q61345 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Gm8318-201ENSMUST00000182954 872 ntBASIC17.11■□□□□ 0.33
Foxd1Q61345 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.11■□□□□ 0.33
Foxd1Q61345 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxd1Q61345 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Foxd1Q61345 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.1■□□□□ 0.33
Foxd1Q61345 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Gm45784-201ENSMUST00000188360 142 ntBASIC17.1■□□□□ 0.33
Foxd1Q61345 Gm2272-201ENSMUST00000194903 582 ntBASIC17.1■□□□□ 0.33
Foxd1Q61345 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.1■□□□□ 0.33
Foxd1Q61345 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.1■□□□□ 0.33
Foxd1Q61345 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Foxd1Q61345 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxd1Q61345 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxd1Q61345 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Foxd1Q61345 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms