Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Mre11Q61216 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.8■□□□□ 0.44
Mre11Q61216 Mir7071-201ENSMUST00000184847 69 ntBASIC17.8■□□□□ 0.44
Mre11Q61216 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.8■□□□□ 0.44
Mre11Q61216 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mre11Q61216 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.79■□□□□ 0.44
Mre11Q61216 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.79■□□□□ 0.44
Mre11Q61216 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.79■□□□□ 0.44
Mre11Q61216 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.79■□□□□ 0.44
Mre11Q61216 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Mre11Q61216 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.79■□□□□ 0.44
Mre11Q61216 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.79■□□□□ 0.44
Mre11Q61216 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.79■□□□□ 0.44
Mre11Q61216 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Mre11Q61216 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.79■□□□□ 0.44
Mre11Q61216 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Mre11Q61216 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Mre11Q61216 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mre11Q61216 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.78■□□□□ 0.44
Mre11Q61216 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.78■□□□□ 0.44
Mre11Q61216 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Mre11Q61216 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.78■□□□□ 0.44
Mre11Q61216 Gm18101-201ENSMUST00000215769 548 ntBASIC17.78■□□□□ 0.44
Mre11Q61216 Gm30025-201ENSMUST00000218555 728 ntBASIC17.78■□□□□ 0.44
Mre11Q61216 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.78■□□□□ 0.44
Mre11Q61216 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.78■□□□□ 0.44
Mre11Q61216 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.78■□□□□ 0.44
Mre11Q61216 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Mre11Q61216 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Mre11Q61216 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mre11Q61216 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.77■□□□□ 0.44
Mre11Q61216 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Mre11Q61216 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Mre11Q61216 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Mre11Q61216 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Mre11Q61216 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mre11Q61216 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms