Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scaf1Q5U4C3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Gm11424-201ENSMUST00000121929 829 ntBASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 AC154806.6-201ENSMUST00000228192 202 ntBASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.27■□□□□ 0.68
Scaf1Q5U4C3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scaf1Q5U4C3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scaf1Q5U4C3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Scaf1Q5U4C3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scaf1Q5U4C3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scaf1Q5U4C3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Gm9794-201ENSMUST00000202370 423 ntBASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf1Q5U4C3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Gm14042-201ENSMUST00000120139 833 ntBASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Scaf1Q5U4C3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Gm45668-201ENSMUST00000211271 493 ntBASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf1Q5U4C3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms