Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps54Q5SPW0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Gm13464-201ENSMUST00000119418 935 ntBASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Gm8396-201ENSMUST00000057361 823 ntBASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps54Q5SPW0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps54Q5SPW0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps54Q5SPW0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Gm2810-201ENSMUST00000118681 990 ntBASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Gm11543-201ENSMUST00000120758 370 ntBASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms