Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Mir7085-201ENSMUST00000184353 66 ntBASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Gm37917-201ENSMUST00000194711 392 ntBASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc85aQ5SP85 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.33■□□□□ 0.21
Ccdc85aQ5SP85 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc85aQ5SP85 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc85aQ5SP85 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc85aQ5SP85 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc85aQ5SP85 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc85aQ5SP85 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Gm15824-201ENSMUST00000119516 955 ntBASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Dupd1-202ENSMUST00000224735 548 ntBASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Gm15823-201ENSMUST00000064305 670 ntBASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Ccdc85aQ5SP85 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Gm15653-201ENSMUST00000119247 907 ntBASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Gm13829-201ENSMUST00000119600 138 ntBASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Gm3436-201ENSMUST00000179930 840 ntBASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Gm45668-201ENSMUST00000211271 493 ntBASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Gm16476-201ENSMUST00000221544 139 ntBASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc85aQ5SP85 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Gm22189-201ENSMUST00000103822 86 ntBASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Gm6222-201ENSMUST00000120787 396 ntBASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Gm44719-201ENSMUST00000206404 149 ntBASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc85aQ5SP85 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms