Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm29269-201ENSMUST00000190087 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21722-201ENSMUST00000190153 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm28423-201ENSMUST00000190701 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21899-201ENSMUST00000190745 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21910-201ENSMUST00000191163 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21849-201ENSMUST00000191571 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm28678-201ENSMUST00000191593 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm20910-201ENSMUST00000193268 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21871-201ENSMUST00000194621 696 ntBASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc88aQ5SNZ0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm23984-201ENSMUST00000157139 203 ntBASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm43630-201ENSMUST00000201550 776 ntBASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.94■□□□□ 0.3
Ccdc88aQ5SNZ0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm24543-201ENSMUST00000103867 82 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Mir6420-201ENSMUST00000185032 102 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm28631-201ENSMUST00000190740 334 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm18049-201ENSMUST00000208909 581 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Carlr-201ENSMUST00000181515 2574 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm14042-201ENSMUST00000120139 833 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Mir1938-201ENSMUST00000158746 100 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm38225-201ENSMUST00000194001 393 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.93■□□□□ 0.3
Ccdc88aQ5SNZ0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc88aQ5SNZ0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc88aQ5SNZ0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms