Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav8d-1Q5R1H8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav8d-1Q5R1H8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Gm15372-201ENSMUST00000120729 834 ntBASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav8d-1Q5R1H8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Gm44454-201ENSMUST00000198541 138 ntBASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav8d-1Q5R1H8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav8d-1Q5R1H8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms