Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Gm18195-201ENSMUST00000207604 706 ntBASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5d-4Q5R1F6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5d-4Q5R1F6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5d-4Q5R1F6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5d-4Q5R1F6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5d-4Q5R1F6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav5d-4Q5R1F6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav5d-4Q5R1F6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5d-4Q5R1F6 Carlr-201ENSMUST00000181515 2574 ntBASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Mir5126-201ENSMUST00000175513 77 ntBASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Gm27628-201ENSMUST00000184911 107 ntBASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms