Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm15039-201ENSMUST00000118914 875 ntBASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm8318-201ENSMUST00000182954 872 ntBASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm5587-201ENSMUST00000206270 674 ntBASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm44454-201ENSMUST00000198541 138 ntBASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm18622-201ENSMUST00000219361 595 ntBASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm11950-201ENSMUST00000121615 838 ntBASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav15-1-dv6-1Q5R1D2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms